Alport Syndrome

Diagnosis

Indications for Testing

  • Unexplained hematuria or chronic kidney disease (particularly in men)
  • Unexplained hematuria in women with a family history of chronic kidney disease

Laboratory Testing

  • Genetic testing
    • Diagnostic testing for symptomatic individuals – COL4A5 sequencing, mutations and deletion/duplication
    • Exclude diagnosis of Alport syndrome in patients with positive thin basement membrane nephropathy on biopsy
    • Should not be used for prenatal testing
  • Detailed family and personal history to rule out other possible diseases
  • Audiologic and ophthalmologic exams – may be abnormal

Histology

  • Immunohistochemical analysis of collagen IV expression using renal or skin biopsies
    • Skin biopsies have a higher incidence of false negatives than renal biopsies
  • Electron microscopy of renal biopsy specimen

Differential Diagnosis

Screening

  • Presymptomatic and carrier testing for at-risk individuals who have previously diagnosed family members

Clinical Background

Alport syndrome is a progressive, hereditary renal disease characterized by abnormalities in the glomerular basement membrane (GBM) and commonly associated with cochlear and/or ocular involvement.

Epidemiology

  • Incidence – 1/50,000 live births
  • Age – variable  
    • Autosomal recessive – earliest onset 
    • X-linked – next onset 
    • Autosomal dominant – onset in middle age
  • Sex 
    • M>F for X-linked Alport syndrome – 100% penetrance in males, variable in females
    • M:F, equal for autosomal dominant and recessive forms

Inheritance

  • Alport syndrome forms
    • 80% X-linked, 15% autosomal recessive, and <5% autosomal dominant
  • Autosomal recessive and dominant forms are due to mutations in the COL4A3 and COL4A4genes
  • X-linked form (end-stage renal disease after age 30) is due to mutations in the COL4A5 gene
    • Sequencing of COL4A5 identifies 70% of mutations in affected females and 80% of mutations in affected males regardless of age
    • 75% of adult X-linked Alport syndrome is caused by mutations C1564S, L1649R, and R1677Q
    • De novo mutations in 10-15% of affected males

Pathophysiology

  • Type IV collagen laminin, nidogen and perlecan – major proteins of GBM
  • Alport defects in type IV collagen alpha chain
    • Leads to loss of type IV collagen in the basal lamina
  • Weakened basal lamina results in focal ruptures of glomerular capillary walls

Clinical Presentation

  • Renal
    • Microscopic hematuria and proteinuria, progressive renal insufficiency, end-stage renal disease
      • 95% of females and 100% of males have microscopic hematuria in early childhood
    • 60% of males with X-linked Alport syndrome reach end-stage renal disease by age 30 and 90% by age 40
    • Most individuals with autosomal recessive Alport syndrome reach end-stage renal disease before age 30
    • End-stage renal disease is usually delayed until middle age in autosomal dominant Alport syndrome
  • Cochlear
    • Sensorineural hearing loss
      • Usually presents in late childhood in X-linked Alport syndrome
      • 85% of males with X-linked Alport syndrome have sensorineural deafness by age 40
      • Individuals with autosomal recessive Alport syndrome have juvenile onset
      • Autosomal dominant Alport syndrome is associated with later adult onset
  • Ocular – lenticonus, maculopathy, corneal endothelial vesicles and recurrent corneal abrasions
    • Ocular lesions are uncommon in adult-onset disease
  • Gastrointestinal
    • Leiomyomatosis is occasionally associated with Alport syndrome

Treatment

  • Early disease – antihypertensive drugs and angiotensin converting enzyme inhibitors
  • Renal transplantation for end-stage disease
    • Antibodies may redevelop, but repeat renal failure is uncommon
    • Genetic testing of family members for Alport syndrome is critical when selecting eligible donors

Indications for Laboratory Testing

  • Tests generally appear in the order most useful for common clinical situations
  • Click on number for test-specific information in the ARUP Laboratory Test Directory
Test Name and Number Recommended Use Limitations Follow Up
Alport Syndrome, X-Linked (COL4A5) 3 Mutations 0051710
Method: Polymerase Chain Reaction/Fluorescence Monitoring

Determine the cause of adult type X-linked Alport syndrome by examining three common COL4A5 mutations: C1564S (c.4992G>A), L1649R (c.4946T>G), and R1677Q  (c.5030G>A) 

Clinical sensitivity is 75% for adult type X-linked Alport syndrome 

Analytical sensitivity and specificity are 99%

Mutations other than those targeted will not be detected; analytical sensitivity may be compromised by rare primer or probe site mutations

 
Alport Syndrome, X-linked (COL4A5) Sequencing and Deletion/Duplication 2002398
Method: Polymerase Chain Reaction/ Sequencing/Multiplex Ligation-dependent Probe Amplification

Detect large COL4A5 coding region deletions/duplications

Clinical sensitivity >80% for X-linked Alport syndrome in males and females

Rare diagnostic errors can occur due to primer or probe site mutations

Regulatory region and deep intronic mutations will not be detected

Breakpoints of deletions/duplications will not be determined

Mutations in genes other than COL4A5 are not evaluated

 
Familial Mutation, Targeted Sequencing 2001961
Method: Polymerase Chain Reaction/Sequencing

Identify familial COL4A5 mutation

Must provide copy of laboratory report of affected family member detailing the specific mutation

Mutations other than the one targeted will not be identified

 
Collagen IV by Immunohistochemistry 2003839
Method: Immunohistochemistry

Aid in histologic diagnosis of Alport syndrome   

Stained and returned to client pathologist; if consultation required, contact anatomic pathology, surgical consult or hematopathology

   
Additional Tests Available
 
Click the plus sign to expand the table of additional tests.
Test Name and NumberComments
Alport Syndrome, X-linked (COL4A5) Sequencing 0051786
Method: Polymerase Chain Reaction/Sequencing

Determine the cause of X-linked Alport syndrome

Clinical sensitivity is 80% in males and 70% in females

Alport Syndrome, X-linked (COL4A5) Deletion/Duplication 2002394
Method: Polymerase Chain Reaction/Multiplex Ligation-dependent Probe Amplification

Detect large COL4A5 coding region deletions/duplications

Clinical sensitivity is 10% for X-linked Alport syndrome in males and females