| Test Name and Number |
Recommended Use |
Limitations |
Follow Up |
| Alport Syndrome, X-linked (COL4A5) Sequencing 0051786 Method: Polymerase Chain Reaction/Sequencing |
Determine the cause of X-linked Alport syndrome Clinical sensitivity is 80% in males and 70% in females Analytical sensitivity and specificity are 99% |
Rare diagnostic errors can occur due to prime site mutations Regulatory and deep intronic mutations will not be detected Large deletions/duplications will not be detected in females |
|
| Alport Syndrome, X-linked (COL4A5) 3 Mutations 0051710 Method: Polymerase Chain Reaction/Fluorescence Monitoring |
Determine the cause of adult type X-linked Alport syndrome by examining three common COL4A5 mutations: C1564S (c.4992G>A), L1649R (c.4946T>G), and R1677Q (c.5030G>A) Clinical sensitivity for adult type X-linked Alport syndrome is 75% Analytical sensitivity and specificity is 99% |
Mutations other than those targeted will not be detected; analytical sensitivity may be compromised by rare primer or probe site mutations |
|
| Alport Syndrome, X-linked (COL4A5) Deletion/Duplication 2002394 Method: Polymerase Chain Reaction/Multiplex Ligation-dependent Probe Amplification |
Detect large COL4A5 coding region deletions and duplications Clinical sensitivity is 10% for X-linked Alport syndrome in males and females Analytical sensitivity and specificity: 99% |
Rare diagnostic errors can occur due to primer or probe site mutations Breakpoints of deletions/duplications will not be determined COL4A5 base pair substitutions, small deletions/duplications, deep intronic, and regulatory region mutations will not be detected Mutations in genes other than COL4A5 are not evaluated |
|
| Alport Syndrome, X-linked (COL4A5) Sequencing and Deletion/Duplication 2002398 Method: Polymerase Chain Reaction/ Sequencing/Multiplex Ligation-dependent Probe Amplification |
Detect large COL4A5 coding region deletions and duplications Clinical sensitivity greater than 80% for X-linked Alport syndrome in males and females Analytical sensitivity and specificity: 99% |
Rare diagnostic errors can occur due to primer or probe site mutations Regulatory region and deep intronic mutations will not be detected Breakpoints of deletions/duplications will not be determined Mutations in genes other than COL4A5 are not evaluated |
|
| Familial Mutation, Targeted Sequencing 2001961 Method: Polymerase Chain Reaction/Sequencing |
Custom sequencing for a familial COL4A5 mutation Must provide copy of laboratory report of affected family member detailing the specific mutation |
Mutations other than the one targeted will not be identified |
|
| Immunohistochemistry Stain Offering arup005 Method: Immunohistochemistry |
Identify collagen IV defects |
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